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Miniaturization and Automation of Single-Cell RNAseq Library Preparation

Louise Laurent, MD. PhD
Thursday, February 4, 2016
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Chapters

  • Introduction
  • The Potential of Single-Cell Transcriptome Sequencing
  • The Challenges of Single-Cell Transcriptome Sequencing
  • Questions to answer
  • Overall Approach to establishing reproducibility and validity
  • Single-cell cDNA synthesis
  • mosquito HTS and mosquito HV
  • Single-cell RNAseq library construction
  • Technical Variability
  • Ability to Recognize Biological Variability
  • High Degree of Overlap in Detected transcripts in technical replicates
  • High Degree of Overlap in Detected transcripts in different reaction volumes
  • Reproducible identification of transcripts specifically expressed by individual cells
  • End-to-end automation of workflow
  • Results from Single-Cell RNAseq of A1:F20 beta cell differentiation timecourse
  • NMF Visualization
  • Dendrogram

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